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Marker Overview
| Name | Nem_Aradu.A02_84440594 |
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| Marker Type | SNP |
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| Accession | n/a |
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| Organism | Arachis spp. (multiple peanut species) |
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| Source Description | |
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| Primer1 Sequence | >Nem_Aradu.A02_84440594_Fwd_FAM
GAAGGTGACCAAGTTCATGCTGAAGTGTGTCATAATCTCCAAAGTG |
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| Primer2 Sequence | >Nem_Aradu.A02_84440594_Fwd_VIC
GAAGGTCGGAGTCAACGGATTCTGAAGTGTGTCATAATCTCCAAAGTA |
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| Primer3 Sequence | >Nem_Aradu.A02_84440594_Rev
GGAAGCGGATTCCACTCA |
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| Genetic Map(s) | This marker has not been placed on any genetic maps |
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| Publication(s) | Primary: Leal-Bertioli, Moretzsohn et al., 2016a |
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| Comments | The PCR amplification pattern for Arachis duranensis was not equivalent to the same one exhibited by A. hypogaea and A. monticola; neither of these patterns was the same as the identical one exhibited by A. stenosperma, (A. batizocoi x A. stenosperma)4x, and (A. gregoryi x A. stenosperma)4x. Nem_Aradu.A02_84440594_Rev is an allele flanking reverse primer, Nem_Aradu.A02_84440594_Fwd_FAM is an allele-specific forward primer that detects SNP allele A, and Nem_Aradu.A02_84440594_Fwd_VIC is an allele-specific forward primer that detects SNP allele G. The SNP is specifically a Single Nucleotide Polymorphism Kompetitive Allele Specific Polymerase Chain Reaction (SNP-KASP) marker. This marker is associated with the A. stenosperma-derived Root Knot Nematode resistance locus on linkage group A02 and was validated in a tetraploid context. Nem_Aradu.A02_84440594 was developed using information taken from the A. duranensis genome sequence. |
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| Sequence | unknown |
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Marker Positions
| Name | Nem_Aradu.A02_84440594 |
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| Physical position(s) | physical position unknown |
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| Map Position(s) | This marker is not placed on any map. |
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