Marker Overview
NameTOG903757_1119_A09_116533871
Marker TypeSNP
Accessionn/a
OrganismArachis spp. (multiple peanut species)
Source Description
Primer1 Sequence
>TOG903757_1119_A09_116533871_Fwd_FAM
GAAGGTGACCAAGTTCATGCTCACTTGATTTGATATGAGATTTCCTC
Primer2 Sequence
>TOG903757_1119_A09_116533871_Fwd_VIC
GAAGGTCGGAGTCAACGGATTACTTGATTTGATATGAGATTTCCTG
Primer3 Sequence
>TOG903757_1119_A09_116533871_Rev
CCCAAGAAGCAGGGTACTTT
Genetic Map(s)This marker has not been placed on any genetic maps
Publication(s)Primary: Leal-Bertioli, Moretzsohn et al., 2016a
CommentsThe same PCR amplification pattern was observed for Arachis stenosperma, (A. batizocoi x A. stenosperma)4x, (A. gregoryi x A. stenosperma)4x, A. duranensis, A. hypogaea, and A. monticola. TOG903757_1119_A09_116533871_Rev is an allele flanking reverse primer, TOG903757_1119_A09_116533871_Fwd_VIC is an allele-specific forward primer that detects SNP allele G, and TOG903757_1119_A09_116533871_Fwd_FAM is an allele-specific forward primer that detects SNP allele C. The SNP is specifically a Single Nucleotide Polymorphism Kompetitive Allele Specific Polymerase Chain Reaction (SNP-KASP) marker. This marker is associated with the A. stenosperma-derived Root Knot Nematode resistance locus on linkage group A09 and was validated in a tetraploid context. TOG903757_1119_A09_116533871 was developed using information taken from the A. duranensis genome sequence.
Sequenceunknown
Marker Positions
NameTOG903757_1119_A09_116533871
Physical position(s)physical position unknown
Map Position(s)This marker is not placed on any map.