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Overview
| Project Name | Arachis ipaensis cultivar: K30076 Genome sequencing |
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Properties
Additional information about this project:
| Property Name | Value |
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| Contributors | David J. Bertioli, Soraya Leal-Bertioli, Mark D. Burrow, Ethalinda K.S. Cannon, Steven B. Cannon, Sudhansu Dash, Lutz Froenicke, Patricia Guimaraes, Scott A. Jackson, Richard W. Michelmore, Marcia C. Moretzsohn, Brian E. Scheffler, Liu Xin, Rajeev Varshney |
| Project start date | 2013 |
| Estimated size | 1.56Gb |
| Source mat id | acc:K30076;source:(Active Germplasm Bank of Embrapa Genetic Resources and Biotechnology; |
| Project type | genome assembly |
| Project description | Arachis ipaensis is a wild annual plant native to Bolivia. It is thought to be one of the diploid ancestors of cultivated tetraploid peanut. Arachis ipaensis accession K30076 was sequenced at Beijing Genomics Institute, with funding from The Peanut Foundation, as part of the International Peanut Genome Initiative. The sequencing stragety was whole-genome shotgun, from eight Illumina paired-end sequencing libraries, with insert sizes ranging from 170 bp to 40 kb. The primary contig and scaffold assemblies were constructed using SOAPdenovo (v2.04). Additional scaffolding was conducted using the SSPACE software. |
| Release date | 1/13/2015 |
| Funding | The Peanut Foundatino |
| Consortium | The International Peanut Genome Initiative |
| Consortium URL | http://www.peanutbioscience.com/peanutgenomeinitiative.html |
| Data provider | Iowa State University |
| Submitting organization | The Peanut Foundation |
| Submitting organization URL | http://www.peanutfoundation.org |
| Investigation type | eucaryote |
| Project PI | Scott Jackson |
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