QTL data at PeanutBase

Overview | Search | Traits | Available Datasets | Submit Data

Overview

A major effort at PeanutBase is to collect published peanut QTL information and integrate it into a common genetic framework. The QTL data is loaded into PeanutBase and integrated with other genetic and genomic data. These data can be searched and viewed on genetic maps.

Search for QTL

Search for specific traits and QTL here.

Peanut Traits

Download: peanut traits defined by PeanutBase
Use and development of formal ontologies are essential. We are working with other legume communities to create a consistent trait terminology, using specialized terms for peanut where necessary. This will enable PeanutBase to integrate with trait information for multiple legume species available at LegumeInfo.org and other plant genetic databases. Peanut QTL data are collected from published resources; we then apply our standard trait terminology and definitions before presentation on the site. We have made the evolving trait terminology available for download as an excel spreadsheet.

We welcome and encourage comments and suggestions from the community.

Available QTL datasets

File namesort descendingSizeModifiedDescription
BurowStarr2014.xls45.5 KBThu, 10/08/2015 - 13:56The QTL dataset associated with "Burow, Star et al., 2014a".
CavalcanteMoretzsohn2014.xls18 KBWed, 09/16/2015 - 21:03The QTL dataset associated with "Cavalcante, Moretzsohn et al., 2014a".
FoncekaTossim2012a.xls68.5 KBThu, 02/05/2015 - 12:57The QTL dataset associated with "Fonc├ęka, Tossim et al., 2012a".
MondalHadapad2014.xls40 KBWed, 09/16/2015 - 21:13The QTL dataset associated with "Mondal, Hadapad et al., 20142a".
MoretzsohnLeal-Bertioli2015.xls18 KBWed, 09/16/2015 - 21:07The QTL dataset associated with "Moretzsohn, Leal-Bertioli et al., 2015a"
QinFeng2012a.xls25.5 KBThu, 02/05/2015 - 12:58The QTL dataset associated with "Qin, Feng et al. 2012a"
SarvamangalaGowda2011.xls70.5 KBWed, 09/02/2015 - 16:59The QTL dataset associated with "Sarvamangala, Gowda et al. 2011a"
Traits_LIS_PeanutBase.xls78.5 KBThu, 09/17/2015 - 12:16Traits defined by PeanutBase and LegumeInfo.
user_genetic_example.xlsx46.08 KBFri, 12/12/2014 - 12:12Example of a Map/Markers/QTL spreadsheet; version Nov 2014.
user_genetic_template.xlsx30.3 KBFri, 12/12/2014 - 12:13Template for submitting Map/Markers/QTL data; version Nov 2014.
WangPandey2013a.xls50.5 KBThu, 02/05/2015 - 12:58The QTL dataset associated with "Wang, Pandey et al., 2013a".

Submit QTL Data

Download: Data submission template
Download: Example submission spreadsheet
If you have data to contribute (markers, maps, phenotyping, QTL studies), we would be more than happy to work with you. The template above accepts data for any publications, maps, markers, and/or QTL that you may have to contribute. Please contact us and we can help guide you through the process. More information about submitting data is here.