QTL data at PeanutBase

Overview | Search | Traits | Available Datasets | Submit Data

Overview

A major effort at PeanutBase is to collect published peanut QTL information and integrate it into a common genetic framework. The QTL data is loaded into PeanutBase and integrated with other genetic and genomic data. These data can be searched and viewed on genetic maps.

Peanut Traits

Download: peanut traits defined by PeanutBase
Use and development of formal ontologies are essential. We are working with other legume communities to create a consistent trait terminology, using specialized terms for peanut where necessary. This will enable PeanutBase to integrate with trait information for multiple legume species available at LegumeInfo.org and other plant genetic databases. Peanut QTL data are collected from published resources; we then apply our standard trait terminology and definitions before presentation on the site. We have made the evolving trait terminology available for download as an excel spreadsheet.

We welcome and encourage comments and suggestions from the community.

Available QTL datasets

	File name	Size	Modified	Description
	Traits_LIS_PeanutBase.xls	78.5 KB	Thu, 09/17/2015 - 12:16	Traits defined by PeanutBase and LegumeInfo.
	SarvamangalaGowda2011.xls	70.5 KB	Wed, 09/02/2015 - 16:59	The QTL dataset associated with "Sarvamangala, Gowda et al. 2011a"
	FoncekaTossim2012a.xls	68.5 KB	Thu, 02/05/2015 - 12:57	The QTL dataset associated with "Foncéka, Tossim et al., 2012a".
	WangPandey2013a.xls	50.5 KB	Thu, 02/05/2015 - 12:58	The QTL dataset associated with "Wang, Pandey et al., 2013a".
	user_genetic_example.xlsx	46.08 KB	Fri, 12/12/2014 - 12:12	Example of a Map/Markers/QTL spreadsheet; version Nov 2014.
	BurowStarr2014.xls	45.5 KB	Thu, 10/08/2015 - 13:56	The QTL dataset associated with "Burow, Star et al., 2014a".
	MondalHadapad2014.xls	40 KB	Wed, 09/16/2015 - 21:13	The QTL dataset associated with "Mondal, Hadapad et al., 20142a".
	user_genetic_template.xlsx	30.3 KB	Fri, 12/12/2014 - 12:13	Template for submitting Map/Markers/QTL data; version Nov 2014.
	QinFeng2012a.xls	25.5 KB	Thu, 02/05/2015 - 12:58	The QTL dataset associated with "Qin, Feng et al. 2012a"
	CavalcanteMoretzsohn2014.xls	18 KB	Wed, 09/16/2015 - 21:03	The QTL dataset associated with "Cavalcante, Moretzsohn et al., 2014a".
	MoretzsohnLeal-Bertioli2015.xls	18 KB	Wed, 09/16/2015 - 21:07	The QTL dataset associated with "Moretzsohn, Leal-Bertioli et al., 2015a"