Transcriptome projects underway
A large number of peanut transcriptome sequencing projects are underway in 2013.
Transcriptome projects as of September, 2013 (downloadable Excel file)
peanut_transcriptome_projects_Sept_2013.xlsx
Published transcriptomes
| Descriptions | Data Set | Reference | |
|---|---|---|---|
| Transcriptome assembly | A. hypogaea (several genotypes); Sanger and 454; 101,132 unigenes; Guo et al. BMC Genomics 2012, 13:608 | PRJNA49471 | BMC Genomics 2012, 13:608 |
| Transcriptome assembly | A. duranensis under water stress; 454 assembly; 12,792 contigs; Guimaraes et al. BMC Genomics 2012, 13:387 | BMC Genomics 2012, 13:387 | |
| Transcriptome assembly | A. stenosperma under Cercosporidium personatum fungal infection; 454 assembly; 7,723 contigs; Guimaraes et al. BMC Genomics 2102, 13:387 | BMC Genomics 2012, 13:387 | |
| Transcriptome assembly | A. hypogaea: Mixed assembly of public reads (Sanger, 454, Illumina); described in Duan et al., 2012; | BMC Plant Biology, 12:94 | |
| Transcriptome assembly | A. hypogaea; three aerial and subterranean pod libraries & assembles; 454 sequence; Chen et al., 2013; Plant Biotechnology Journal (2013) 11, pp. 115–127; | SRA053198 | Plant Biotechnology Journal (2013) 11, pp. 115–127 |